Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFX7Regulatory factor X7. (1273 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X-associated protein.
    
 0.934
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 0.915
chek2
Checkpoint kinase 2.
   
 0.839
ciita
NACHT domain-containing protein.
    
 0.809
ENSACLP00000008384
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.669
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
   
 0.655
btaf1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
    
   0.637
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
 
 0.539
espl1
Extra spindle pole bodies like 1, separase.
    
   0.536
ss18
SS18 subunit of BAF chromatin remodeling complex.
      
 0.520
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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