STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020434Actinoporin-like protein. (186 aa)    
Predicted Functional Partners:
LOC113020435
Uncharacterized protein.
  
 
 
0.485
ENSACLP00000024924
Uncharacterized protein.
  
  
 
0.407
LOC113017773
Uncharacterized protein.
  
  
 
0.406
ENSACLP00000009584
Uncharacterized protein.
  
  
 
0.406
ENSACLP00000010188
Uncharacterized protein.
  
  
 
0.406
ENSACLP00000009200
Uncharacterized protein.
  
  
 
0.405
LOC113029744
Uncharacterized protein.
  
  
 
0.403
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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