STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113010685C2 domain-containing protein. (423 aa)    
Predicted Functional Partners:
ENSACLP00000008539
Uncharacterized protein.
     
 0.524
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.524
LOC113031405
Cytochrome b5 reductase 4.
   
 
 0.517
ENSACLP00000012866
Uncharacterized protein.
     
 0.516
ENSACLP00000012873
SH3 domain-containing protein.
     
 0.516
ENSACLP00000014175
Intersectin 2b.
     
 0.516
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
    
 
 0.493
ENSACLP00000005550
ATP-binding cassette, sub-family C (CFTR/MRP), member 8.
    
 0.482
ENSACLP00000016856
Importin 13.
      
 0.476
kbtbd2
Kelch repeat and BTB (POZ) domain containing 2.
      
 0.476
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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