snx10 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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co-expression

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[Homology]

Score

snx10

Sorting nexin 10b. (253 aa)

Predicted Functional Partners:

vps35

0.909

ENSACLP00000016397

0.872

snx15

0.843

LOC113030809

0.803

vps26a

0.803

vps26b

0.803

rps6kc1

0.799

LOC113026417

0.602

LOC113035690

0.597

LOC113010420

0.592

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000016397	LOC113010420	ENSACLP00000016397	ENSACLP00000012428	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Wnt ligand secretion mediator.	0.764
ENSACLP00000016397	LOC113030809	ENSACLP00000016397	ENSACLP00000003941	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Uncharacterized protein.	0.989
ENSACLP00000016397	snx10	ENSACLP00000016397	ENSACLP00000005364	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin 10b.	0.872
ENSACLP00000016397	vps26a	ENSACLP00000016397	ENSACLP00000012134	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	VPS26, retromer complex component A.	0.999
ENSACLP00000016397	vps26b	ENSACLP00000016397	ENSACLP00000013537	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	VPS26, retromer complex component B.	0.989
ENSACLP00000016397	vps35	ENSACLP00000016397	ENSACLP00000015525	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.999
LOC113010420	ENSACLP00000016397	ENSACLP00000012428	ENSACLP00000016397	Wnt ligand secretion mediator.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.764
LOC113010420	LOC113030809	ENSACLP00000012428	ENSACLP00000003941	Wnt ligand secretion mediator.	Uncharacterized protein.	0.693
LOC113010420	snx10	ENSACLP00000012428	ENSACLP00000005364	Wnt ligand secretion mediator.	Sorting nexin 10b.	0.592
LOC113010420	vps26a	ENSACLP00000012428	ENSACLP00000012134	Wnt ligand secretion mediator.	VPS26, retromer complex component A.	0.771
LOC113010420	vps26b	ENSACLP00000012428	ENSACLP00000013537	Wnt ligand secretion mediator.	VPS26, retromer complex component B.	0.693
LOC113010420	vps35	ENSACLP00000012428	ENSACLP00000015525	Wnt ligand secretion mediator.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.885
LOC113026417	snx10	ENSACLP00000036029	ENSACLP00000005364	PX domain-containing protein.	Sorting nexin 10b.	0.602
LOC113030809	ENSACLP00000016397	ENSACLP00000003941	ENSACLP00000016397	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.989
LOC113030809	LOC113010420	ENSACLP00000003941	ENSACLP00000012428	Uncharacterized protein.	Wnt ligand secretion mediator.	0.693
LOC113030809	snx10	ENSACLP00000003941	ENSACLP00000005364	Uncharacterized protein.	Sorting nexin 10b.	0.803
LOC113030809	vps26a	ENSACLP00000003941	ENSACLP00000012134	Uncharacterized protein.	VPS26, retromer complex component A.	0.991
LOC113030809	vps35	ENSACLP00000003941	ENSACLP00000015525	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.994
LOC113035690	snx10	ENSACLP00000028078	ENSACLP00000005364	Sorting nexin 19b.	Sorting nexin 10b.	0.597
LOC113035690	snx15	ENSACLP00000028078	ENSACLP00000032447	Sorting nexin 19b.	Sorting nexin 15.	0.634