Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113032446Chromobox homolog 3b. (192 aa)    
Predicted Functional Partners:
LOC113014873
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
     
  0.871
ENSACLP00000001377
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
     
  0.871
CBX1
Uncharacterized protein.
     
  0.823
cbx5
Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
     
  0.823
CBX1-2
Chromobox homolog 1b (HP1 beta homolog Drosophila).
     
  0.823
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.741
LOC113033615
Histone H2A; Belongs to the histone H2A family.
   
 0.741
ENSACLP00000008291
Chromatin assembly factor 1, subunit A (p150).
    
 
 0.678
emsy
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.653
RING1
Ring finger protein 1.
    
 0.613
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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