STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005413Ig-like domain-containing protein. (239 aa)    
Predicted Functional Partners:
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.868
ENSACLP00000024801
Ig-like domain-containing protein.
   
 
0.849
ENSACLP00000002967
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.787
LOC113009925
Ig-like domain-containing protein.
  
 
0.773
ENSACLP00000037347
Ig-like domain-containing protein.
  
 
0.771
LOC113017706
Ig-like domain-containing protein.
  
 
0.769
ENSACLP00000040459
Ig-like domain-containing protein.
  
 
0.766
ENSACLP00000019783
Ig-like domain-containing protein.
  
 
0.764
ENSACLP00000038087
Ig-like domain-containing protein.
  
 
0.764
ENSACLP00000024157
Ig-like domain-containing protein.
  
 
0.763
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.