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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005414Si:ch211-105f12.2. (220 aa)    
Predicted Functional Partners:
ENSACLP00000008539
Uncharacterized protein.
    
 0.997
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.997
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
    
   0.738
mapk8ip2
Mitogen-activated protein kinase 8 interacting protein 2.
    
   0.738
tspo
Translocator protein.
    
 0.725
rims3
Regulating synaptic membrane exocytosis 3.
    
 0.704
ENSACLP00000008624
Regulating synaptic membrane exocytosis 2b.
    
 0.704
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.704
ENSACLP00000020902
Regulating synaptic membrane exocytosis 1a.
    
 0.704
ENSACLP00000026004
SH3 domain-containing protein.
    
   0.693
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.