STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113009377Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
ENSACLP00000001671
Afadin, adherens junction formation factor a.
    
 0.631
ENSACLP00000003584
Uncharacterized protein.
    
 0.631
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.523
LOC113015779
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.523
ENSACLP00000041338
Junctional adhesion molecule 2a.
    
 0.519
LOC113030260
Junctional adhesion molecule 3b.
    
  0.503
jam3
Junctional adhesion molecule 3a.
    
  0.503
ENSACLP00000007689
Uncharacterized protein.
    
 0.497
ENSACLP00000013773
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.497
ENSACLP00000027191
Uncharacterized protein.
    
 0.497
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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