Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLHL28Kelch like family member 28. (571 aa)    
Predicted Functional Partners:
klhl14
Kelch-like family member 14.
    
  0.952
IPP
Intracisternal A particle-promoted polypeptide.
    
  0.933
klhl26
Kelch-like family member 26.
    
  0.909
klhl24
Kelch-like family member 24a.
   
   0.908
ENSACLP00000021001
F-box and leucine-rich repeat protein 17.
    
 0.904
nudcd3
NudC domain containing 3.
    
 
 0.860
LOC113036190
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.857
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.857
KLHL21
Kelch-like family member 21.
    
  0.844
ENSACLP00000026979
Kelch-like family member 21.
    
  0.844
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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