Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005442Protein kinase domain-containing protein. (164 aa)    
Predicted Functional Partners:
ENSACLP00000014482
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
  0.889
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.889
dcp1a
Decapping mRNA 1A.
    
   0.745
LOC113009769
Decapping mRNA 1B.
    
   0.745
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.706
LOC113035244
Centrin, EF-hand protein, 2.
    
 0.653
crppa
CDP-L-ribitol pyrophosphorylase A.
    
 0.653
cetn3
Centrin 3.
    
 0.653
LOC113031395
Centrin 4.
    
 0.653
ENSACLP00000017156
WD repeat domain 90.
    
  0.644
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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