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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005454Carbonic anhydrase IV b; Belongs to the alpha-carbonic anhydrase family. (275 aa)    
Predicted Functional Partners:
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.598
ENSACLP00000011183
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
  
 
0.575
ENSACLP00000003979
Carbonic anhydrase VIII; Belongs to the alpha-carbonic anhydrase family.
  
 
0.572
LOC113010962
Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family.
  
 
0.569
ENSACLP00000025744
Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family.
  
  
 
0.555
ca14
Carbonic anhydrase XIV; Belongs to the alpha-carbonic anhydrase family.
  
  
 
0.540
RPL5
Ribosomal protein L5.
    
 
 0.533
RPL5-2
Ribosomal protein L5b.
    
 
 0.533
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.519
wdr43
WD repeat domain 43.
   
    0.499
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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