Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HS3ST1Sulfotransferase; Belongs to the sulfotransferase 1 family. (292 aa)    
Predicted Functional Partners:
LOC113035192
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
  0.872
LOC113033560
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
  0.872
gpc2
Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.571
LOC113007382
Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.571
LOC113033455
Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.571
LOC113021224
Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.571
LOC113021803
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.540
glce
Glucuronic acid epimerase b.
      
 0.513
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.498
LOC113031828
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.478
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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