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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005487Metaxin. (337 aa)    
Predicted Functional Partners:
samm50
Sorting and assembly machinery component 50 homolog, like.
   
 0.964
LOC113026385
POTRA domain-containing protein.
   
 0.964
mtx2
Metaxin 2.
    
0.921
LOC113014960
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.861
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.861
LOC113017584
Mitochondrial import receptor subunit TOM40B-like.
   
 0.861
tomm40
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 0.861
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
    
 0.854
LOC113014137
PVR cell adhesion molecule related 2 like.
   
 0.828
LOC113032396
Si:ch73-22o12.1.
   
 0.828
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.