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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005496Ig-like domain-containing protein. (120 aa)    
Predicted Functional Partners:
ENSACLP00000002967
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.795
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.795
ENSACLP00000010675
Uncharacterized protein.
    
  0.729
ENSACLP00000010692
Uncharacterized protein.
    
  0.729
LOC113010188
Uncharacterized protein.
    
  0.729
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 0.698
ENSACLP00000024801
Ig-like domain-containing protein.
  
 
0.682
ENSACLP00000012805
Uncharacterized protein.
    
  0.636
cd247
Uncharacterized protein.
   
 
  0.544
ENSACLP00000041371
Ig-like domain-containing protein.
  
 
  0.518
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.