ENSACLP00000005496 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Score

ENSACLP00000005496

Ig-like domain-containing protein. (120 aa)

Predicted Functional Partners:

ENSACLP00000002967

0.787

cd74

0.787

ENSACLP00000024801

0.732

ENSACLP00000013083

0.642

ENSACLP00000012805

0.605

cd247

0.583

mrps11

0.562

ENSACLP00000010675

0.549

ENSACLP00000010692

0.549

LOC113010188

0.549

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000002967	ENSACLP00000005496	ENSACLP00000002967	ENSACLP00000005496	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	Ig-like domain-containing protein.	0.787
ENSACLP00000002967	ENSACLP00000010675	ENSACLP00000002967	ENSACLP00000010675	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein.	0.422
ENSACLP00000002967	ENSACLP00000010692	ENSACLP00000002967	ENSACLP00000010692	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein.	0.422
ENSACLP00000002967	ENSACLP00000024801	ENSACLP00000002967	ENSACLP00000024801	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	Ig-like domain-containing protein.	0.995
ENSACLP00000002967	LOC113010188	ENSACLP00000002967	ENSACLP00000034665	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	Uncharacterized protein.	0.422
ENSACLP00000005496	ENSACLP00000002967	ENSACLP00000005496	ENSACLP00000002967	Ig-like domain-containing protein.	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.787
ENSACLP00000005496	ENSACLP00000010675	ENSACLP00000005496	ENSACLP00000010675	Ig-like domain-containing protein.	Uncharacterized protein.	0.549
ENSACLP00000005496	ENSACLP00000010692	ENSACLP00000005496	ENSACLP00000010692	Ig-like domain-containing protein.	Uncharacterized protein.	0.549
ENSACLP00000005496	ENSACLP00000012805	ENSACLP00000005496	ENSACLP00000012805	Ig-like domain-containing protein.	Uncharacterized protein.	0.605
ENSACLP00000005496	ENSACLP00000013083	ENSACLP00000005496	ENSACLP00000013083	Ig-like domain-containing protein.	Si:dkey-201i24.3.	0.642
ENSACLP00000005496	ENSACLP00000024801	ENSACLP00000005496	ENSACLP00000024801	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.732
ENSACLP00000005496	LOC113010188	ENSACLP00000005496	ENSACLP00000034665	Ig-like domain-containing protein.	Uncharacterized protein.	0.549
ENSACLP00000005496	cd247	ENSACLP00000005496	ENSACLP00000005978	Ig-like domain-containing protein.	Uncharacterized protein.	0.583
ENSACLP00000005496	cd74	ENSACLP00000005496	ENSACLP00000013069	Ig-like domain-containing protein.	CD74 molecule, major histocompatibility complex, class II invariant chain a.	0.787
ENSACLP00000005496	mrps11	ENSACLP00000005496	ENSACLP00000029360	Ig-like domain-containing protein.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.562
ENSACLP00000010675	ENSACLP00000002967	ENSACLP00000010675	ENSACLP00000002967	Uncharacterized protein.	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.422
ENSACLP00000010675	ENSACLP00000005496	ENSACLP00000010675	ENSACLP00000005496	Uncharacterized protein.	Ig-like domain-containing protein.	0.549
ENSACLP00000010675	ENSACLP00000010692	ENSACLP00000010675	ENSACLP00000010692	Uncharacterized protein.	Uncharacterized protein.	0.430
ENSACLP00000010675	ENSACLP00000012805	ENSACLP00000010675	ENSACLP00000012805	Uncharacterized protein.	Uncharacterized protein.	0.540
ENSACLP00000010675	ENSACLP00000024801	ENSACLP00000010675	ENSACLP00000024801	Uncharacterized protein.	Ig-like domain-containing protein.	0.724