Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113030025Interferon regulatory factor 2 binding protein 1. (594 aa)    
Predicted Functional Partners:
irf2
Interferon regulatory factor.
    
 
 0.875
vgll4
Vestigial-like family member 4b.
    
 
 0.840
ENSACLP00000011872
Solute carrier family 19 member 2.
     
  0.789
fosl2
Fos-like antigen 2.
    
   0.639
LOC113033532
Vestigial like 4 like.
    
 
 0.633
LOC113036169
Solute carrier family 19 member 3a.
     
  0.625
LOC113036121
Solute carrier family 19 member 3a.
     
  0.625
ENSACLP00000008597
Solute carrier family 19 member 3b.
     
  0.625
LOC113023765
Junction plakoglobin a.
    
 
 0.596
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.583
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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