Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005500Reverse transcriptase domain-containing protein. (830 aa)    
Predicted Functional Partners:
LOC113014137
PVR cell adhesion molecule related 2 like.
    
  0.835
LOC113032396
Si:ch73-22o12.1.
    
  0.835
ENSACLP00000002698
Integrin beta; Belongs to the integrin beta chain family.
    
  0.692
LOC113010138
Integrin beta; Belongs to the integrin beta chain family.
    
  0.692
ENSACLP00000013728
Integrin beta; Belongs to the integrin beta chain family.
    
  0.692
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.692
ENSACLP00000021556
PSI domain-containing protein.
    
  0.692
itgb5
Integrin beta; Belongs to the integrin beta chain family.
    
  0.692
LOC113008411
Integrin beta.
    
  0.692
mcam
Melanoma cell adhesion molecule b.
     
  0.683
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.