STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mettl6Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (292 aa)    
Predicted Functional Partners:
sars1
Seryl-tRNA synthetase.
    
 
 0.978
trip12
Thyroid hormone receptor interactor 12.
    
   0.875
rspry1
Ring finger and SPRY domain containing 1.
   
 
 0.743
eaf1
ELL associated factor 1.
      
 0.725
ENSACLP00000040518
Protein-L-isoaspartate O-methyltransferase.
    
 
 0.708
dalrd3
DALR anticodon binding domain containing 3.
    
 
 0.704
rerg
RAS like estrogen regulated growth inhibitor.
      
 0.702
gpatch3
G patch domain containing 3.
      
 0.701
ENSACLP00000029276
Uncharacterized protein.
    
 
 0.698
sars2
Seryl-tRNA synthetase 2, mitochondrial.
    
 
 0.687
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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