Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam83bFamily with sequence similarity 83 member B. (878 aa)    
Predicted Functional Partners:
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
   0.888
LOC113025140
Si:dkey-30c15.10.
    
 
 0.775
anln
Anillin, actin binding protein.
    
 
 0.775
LOC113021340
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 
 0.741
csnk1e
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.741
LOC113027619
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
 
 0.741
CSNK1D
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 
 0.741
LOC113022890
Family with sequence similarity 83 member D.
     
 0.733
ccdc6
Coiled-coil domain containing 6a.
      
 0.705
ENSACLP00000005116
Penta-EF-hand domain containing 1.
      
 0.700
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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