Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113030643PH domain-containing protein. (1524 aa)    
Predicted Functional Partners:
sptan1
Spectrin alpha, non-erythrocytic 1.
   
 0.927
LOC113030014
Spectrin beta chain; Belongs to the spectrin family.
     
  0.859
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
     
  0.649
ENSACLP00000005547
Spectrin beta chain; Belongs to the spectrin family.
     
  0.649
LOC113011686
Spectrin beta chain; Belongs to the spectrin family.
     
  0.649
ENSACLP00000026283
Spectrin, beta, non-erythrocytic 5.
     
  0.649
ENSACLP00000026550
Spectrin beta chain; Belongs to the spectrin family.
     
  0.649
ENSACLP00000033781
PH domain-containing protein.
     
  0.649
ercc6l
Excision repair cross-complementation group 6-like.
    
 
 0.540
LOC113033420
Adducin 2 (beta).
    
 
 0.521
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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