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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005550ATP-binding cassette, sub-family C (CFTR/MRP), member 8. (1562 aa)    
Predicted Functional Partners:
kcnj11
Potassium inwardly-rectifying channel, subfamily J, member 11.
 
 
 0.974
kcnj8
Potassium inwardly-rectifying channel, subfamily J, member 8.
 
 
 0.964
LOC113011053
Zgc:171558.
    
 0.865
rapgef4
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.865
ENSACLP00000030648
Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.
   
 0.738
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.674
LOC113012815
Rap guanine nucleotide exchange factor (GEF) 3.
    
 0.673
LOC113020914
Uncharacterized protein.
   
 0.660
LOC113025015
Potassium inwardly-rectifying channel, subfamily J, member 11, like.
 
 
 0.637
LOC113021012
SLC9A3 regulator 1b.
   
 0.633
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.