STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022122Un-named sa1614. (1008 aa)    
Predicted Functional Partners:
ENSACLP00000014482
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
   
 
 0.756
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
 0.756
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
    
0.746
arfgap3
ADP-ribosylation factor GTPase activating protein 3.
    
0.738
ENSACLP00000000315
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.726
ENSACLP00000033739
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.726
LOC113013301
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
   
0.716
ENSACLP00000022676
Uncharacterized protein.
  
 
 
0.703
ENSACLP00000022875
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
  
 
 
0.702
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.690
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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