Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005560Cardiomyopathy associated 5. (1570 aa)    
Predicted Functional Partners:
ENSACLP00000021289
LIM zinc-binding domain-containing protein.
   
 
 0.916
myoz1
Uncharacterized protein.
   
 
 0.771
LOC113023901
Uncharacterized protein.
   
  
 0.753
pask
PAS domain containing serine/threonine kinase.
    
 
 0.733
myot
Myotilin.
   
 
 0.727
LOC113026134
Uncharacterized protein.
   
 
 0.722
LOC113032989
SET and MYND domain containing 1b.
   
 
 0.722
ACSF3
Acyl-CoA synthetase family member 3.
      
 0.707
smyd4
SET and MYND domain containing 4.
   
 
 0.666
trmt112
tRNA methyltransferase subunit 11-2.
      
 0.655
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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