Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005585MID1 interacting protein 1. (135 aa)    
Predicted Functional Partners:
zbtb8a
Zinc finger and BTB domain containing 8A.
      
 0.694
ginm1
Glycoprotein integral membrane 1.
      
 0.670
tatdn2
TatD DNase domain containing 2.
      
 0.615
haus8
Uncharacterized protein.
      
 0.609
LOC113036739
Thyroid hormone responsive.
    
  0.586
ENSACLP00000040108
MID1 interacting protein 1.
    
  0.586
LOC113014662
Mab-21 domain-containing protein.
     
  0.582
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.559
PCED1A
PC-esterase domain containing 1A.
      
 0.557
LOC113010688
IFI30 lysosomal thiol reductase.
    
  0.553
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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