Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113015542Tetraspanin. (249 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
    
 0.814
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.606
LOC113022284
Macrophage stimulating 1 receptor a.
    
  0.606
mst1r
Macrophage stimulating 1 receptor b.
    
  0.606
ggcx
Gamma-glutamyl carboxylase.
    
   0.604
gria2
Glutamate receptor, ionotropic, AMPA 2b.
   
  0.547
LOC113024706
Uncharacterized protein.
   
  0.547
LOC113016275
Proline rich Gla (G-carboxyglutamic acid) 1.
    
 
 0.541
LOC113016275-2
Transmembrane gamma-carboxyglutamic acid protein 1-like.
    
 
 0.541
tspan31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.522
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.