Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113015574Uncharacterized protein; Belongs to the DEAD box helicase family. (741 aa)    
Predicted Functional Partners:
tbk1
TANK-binding kinase 1.
    
 0.937
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.898
ddx3x
DEAD-box helicase 3 X-linked a.
     
  0.872
LOC113032175
Interleukin 11a.
     
 0.854
galt
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
    
  0.849
LOC113016946
Uncharacterized protein.
     
 0.845
il13ra2
Interleukin 13 receptor, alpha 2.
     
  0.841
LOC113031710
Uncharacterized protein.
     
  0.840
eif3b
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.828
eftud2
Elongation factor Tu GTP binding domain containing 2.
  
 0.827
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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