STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tent2Terminal nucleotidyltransferase 2. (486 aa)    
Predicted Functional Partners:
ENSACLP00000018777
Cytoplasmic polyadenylation element binding protein 1b.
   
 
 0.853
ENSACLP00000008384
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
  0.852
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
  0.810
ENSACLP00000003442
FA complementation group E.
   
  0.810
sympk
Symplekin.
   
 
 0.666
ENSACLP00000015120
Bicaudal C homolog 2.
   
 
 0.642
bicc1
BicC family RNA binding protein 1a.
   
 
 0.642
ENSACLP00000015594
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
  
 0.577
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 0.557
lin28b
Lin-28 homolog B (C. elegans).
   
 0.547
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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