Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
btbd9BTB (POZ) domain containing 9. (614 aa)    
Predicted Functional Partners:
faf1
Fas (TNFRSF6) associated factor 1.
    
   0.974
ubxn1
UBX domain protein 1.
    
   0.974
ENSACLP00000035637
UBX domain-containing protein 7.
    
   0.974
LOC113036190
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.902
CUL3
Cullin 3; Belongs to the cullin family.
    
 
 0.902
usp25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
   
   0.787
LOC113030422
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.
   
   0.787
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.724
gdf15
TGF_BETA_2 domain-containing protein.
      
 0.707
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.701
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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