STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008948Aurora kinase B; Belongs to the protein kinase superfamily. (331 aa)    
Predicted Functional Partners:
ENSACLP00000018315
Uncharacterized protein.
   
 0.994
cdca8
Cell division cycle associated 8.
   
 0.985
ENSACLP00000003678
TPX2 microtubule nucleation factor.
   
 0.984
LOC113028579
Baculoviral IAP repeat containing 5a.
   
 0.984
LOC113013372
Baculoviral IAP repeat containing 5b.
   
 0.976
ENSACLP00000028406
NDC80 kinetochore complex component.
   
 
 0.965
ENSACLP00000018312
Baculoviral IAP repeat containing 6.
   
 0.962
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.962
ENSACLP00000002644
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.952
ENSACLP00000035671
Cell division cycle 20 homolog.
   
 0.934
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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