coil protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

coil

Coilin p80. (525 aa)

Predicted Functional Partners:

ENSACLP00000010695

0.967

sart3

0.958

psme3

0.952

snrpb

0.949

wrap53

0.930

LOC113007098

0.889

polr2l

0.843

prpf4

0.828

LOC113032344

0.816

atxn1

0.816

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000010695	coil	ENSACLP00000010695	ENSACLP00000005635	Survival of motor neuron 1, telomeric.	Coilin p80.	0.967
ENSACLP00000010695	snrpb	ENSACLP00000010695	ENSACLP00000021619	Survival of motor neuron 1, telomeric.	Small nuclear ribonucleoprotein-associated protein.	0.955
ENSACLP00000010695	wrap53	ENSACLP00000010695	ENSACLP00000027950	Survival of motor neuron 1, telomeric.	WD repeat containing, antisense to TP53.	0.772
LOC113007098	coil	ENSACLP00000004189	ENSACLP00000005635	Uncharacterized protein.	Coilin p80.	0.889
LOC113007098	snrpb	ENSACLP00000004189	ENSACLP00000021619	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.893
LOC113007098	wrap53	ENSACLP00000004189	ENSACLP00000027950	Uncharacterized protein.	WD repeat containing, antisense to TP53.	0.584
LOC113032344	atxn1	ENSACLP00000008373	ENSACLP00000022731	Ataxin 1b.	Ataxin 1a.	0.872
LOC113032344	coil	ENSACLP00000008373	ENSACLP00000005635	Ataxin 1b.	Coilin p80.	0.816
atxn1	LOC113032344	ENSACLP00000022731	ENSACLP00000008373	Ataxin 1a.	Ataxin 1b.	0.872
atxn1	coil	ENSACLP00000022731	ENSACLP00000005635	Ataxin 1a.	Coilin p80.	0.816
coil	ENSACLP00000010695	ENSACLP00000005635	ENSACLP00000010695	Coilin p80.	Survival of motor neuron 1, telomeric.	0.967
coil	LOC113007098	ENSACLP00000005635	ENSACLP00000004189	Coilin p80.	Uncharacterized protein.	0.889
coil	LOC113032344	ENSACLP00000005635	ENSACLP00000008373	Coilin p80.	Ataxin 1b.	0.816
coil	atxn1	ENSACLP00000005635	ENSACLP00000022731	Coilin p80.	Ataxin 1a.	0.816
coil	polr2l	ENSACLP00000005635	ENSACLP00000039565	Coilin p80.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.843
coil	prpf4	ENSACLP00000005635	ENSACLP00000028020	Coilin p80.	PRP4 pre-mRNA processing factor 4 homolog (yeast).	0.828
coil	psme3	ENSACLP00000005635	ENSACLP00000036978	Coilin p80.	Proteasome activator subunit 3.	0.952
coil	sart3	ENSACLP00000005635	ENSACLP00000038279	Coilin p80.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.958
coil	snrpb	ENSACLP00000005635	ENSACLP00000021619	Coilin p80.	Small nuclear ribonucleoprotein-associated protein.	0.949
coil	wrap53	ENSACLP00000005635	ENSACLP00000027950	Coilin p80.	WD repeat containing, antisense to TP53.	0.930