Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc77Coiled-coil domain containing 77. (491 aa)    
Predicted Functional Partners:
c7h18orf54
Uncharacterized protein.
      
 0.780
letm2
Leucine zipper-EF-hand containing transmembrane protein 2.
    
   0.768
letm1
Leucine zipper-EF-hand containing transmembrane protein 1.
    
   0.768
LOC113013211
Nuclear envelope integral membrane protein 1.
   
  
 0.728
cep85
Centrosomal protein 85.
   
  
 0.723
znf367
Zinc finger protein 367.
      
 0.722
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.696
ENSACLP00000005742
Uncharacterized protein.
   
  
 0.688
ENSACLP00000011011
Uncharacterized protein.
  
  
 0.682
mtfr1l
Mitochondrial fission regulator 1-like.
   
  
 0.659
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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