Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
hvcn1Hydrogen voltage-gated channel 1. (227 aa)    
Predicted Functional Partners:
stbd1
CBM20 domain-containing protein.
     
 0.626
tm9sf2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.573
ENSACLP00000024569
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.564
LOC113032463
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.559
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.554
vsir
V-set immunoregulatory receptor.
      
 0.549
galm
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
   
 
 0.536
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.524
trpv4
Transient receptor potential cation channel, subfamily V, member 4; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.524
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.513
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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