Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113033109Homer scaffold protein 1b. (363 aa)    
Predicted Functional Partners:
LOC113010015
WH1 domain-containing protein.
    
  0.987
ENSACLP00000033147
Homer scaffold protein 3b.
    
  0.987
grm1
Glutamate receptor, metabotropic 1a.
    
 0.980
LOC113030687
Glutamate receptor, metabotropic 5a.
    
 0.977
LOC113011728
Glutamate receptor, metabotropic 1b.
    
 0.977
grm5
Glutamate receptor, metabotropic 5b.
    
 0.977
ENSACLP00000002631
Uncharacterized protein.
    
   0.974
ENSACLP00000003818
Uncharacterized protein.
    
 0.934
ENSACLP00000018695
PDZ domain-containing protein.
    
 0.934
shank1
SH3 and multiple ankyrin repeat domains 1.
    
 0.934
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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