Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC113037587Zinc finger, AN1-type domain 3. (230 aa)    
Predicted Functional Partners:
ENSACLP00000011619
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.681
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.681
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.662
ENSACLP00000018519
MAM domain containing glycosylphosphatidylinositol anchor 1.
      
 0.605
wdr43
WD repeat domain 43.
      
 0.605
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
      
 0.569
RAB17
RAB17, member RAS oncogene family.
   
 0.566
LOC113020417
RAB5C, member RAS oncogene family.
   
 0.566
rab20
RAB20, member RAS oncogene family.
   
 0.566
LOC113032232
RAB5A, member RAS oncogene family, b.
   
 0.566
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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