Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005671SCY domain-containing protein. (111 aa)    
Predicted Functional Partners:
ENSACLP00000011049
Uncharacterized protein.
  
   
 0.613
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
      
 0.429
LOC113007980
Chemokine (C-X-C motif) receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.414
il10
Interleukin 10.
      
 0.414
LOC113034556
SCY domain-containing protein.
      
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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