Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005685Ig-like domain-containing protein. (134 aa)    
Predicted Functional Partners:
LOC113014953
XK-related protein.
     
  0.820
ENSACLP00000037203
XK-related protein.
     
  0.820
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.776
ENSACLP00000008539
Uncharacterized protein.
     
  0.698
RIMS2
Regulating synaptic membrane exocytosis 2.
     
  0.698
gp1bb
Glycoprotein Ib platelet subunit beta.
    
 0.668
frem1
Fras1 related extracellular matrix 1a.
    
 0.661
ENSACLP00000030575
Fras1 related extracellular matrix 1b.
    
 0.661
ENSACLP00000001877
Fraser extracellular matrix complex subunit 1.
    
 0.654
ENSACLP00000012590
Nucleoporin 214.
    
 0.633
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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