STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005689WD_REPEATS_REGION domain-containing protein. (571 aa)    
Predicted Functional Partners:
ENSACLP00000028350
Tyrosine-protein kinase receptor.
   
 0.694
alk
Tyrosine-protein kinase receptor.
   
 0.694
NEK9
NIMA related kinase 9.
   
  0.670
LOC113007418
RAN binding protein 2.
   
 0.623
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.599
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.597
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.590
mis12
MIS12 kinetochore complex component.
     
 0.587
ENSACLP00000008361
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.586
ENSACLP00000008418
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.586
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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