Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036754Uncharacterized protein. (274 aa)    
Predicted Functional Partners:
ENSACLP00000000949
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.651
ENSACLP00000016271
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.651
dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.647
vps72
Vacuolar protein sorting 72 homolog a.
    
 
 0.599
LOC113010371
Prothymosin alpha b.
   
 
 0.557
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
   0.535
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.502
LOC113033615
Histone H2A; Belongs to the histone H2A family.
   
 
 0.502
ENSACLP00000012590
Nucleoporin 214.
     
  0.497
mrgbp
MRG/MORF4L binding protein.
    
   0.493
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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