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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036754Uncharacterized protein. (274 aa)    
Predicted Functional Partners:
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.761
LOC113033615
Histone H2A; Belongs to the histone H2A family.
   
 
 0.761
ENSACLP00000000949
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.709
ENSACLP00000016271
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.709
xpo6
Exportin 6.
    
  0.525
XPO5
Exportin 5.
    
  0.525
LOC113035269
Exportin 1 (CRM1 homolog, yeast) b.
    
  0.525
ENSACLP00000023160
Exportin 1 (CRM1 homolog, yeast) a.
    
  0.525
ENSACLP00000023197
Uncharacterized protein.
    
  0.525
LOC113008968
Radial spoke head component 4A.
    
  0.525
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.