STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF126Ring finger protein 126. (320 aa)    
Predicted Functional Partners:
rspo2
R-spondin 2.
    
 0.908
LOC113031594
BCL2 associated athanogene 6.
    
 
 0.889
LOC113014194
BCL2 associated athanogene 6, like.
    
 
 0.889
ENSACLP00000000381
R-spondin 1.
    
 0.879
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.839
get4
Guided entry of tail-anchored proteins factor 4.
   
 
 0.815
RPS27A
Ribosomal protein S27a.
    
 0.808
ENSACLP00000029012
R-spondin 3.
    
 0.795
ENSACLP00000009291
Uncharacterized protein.
    
 0.782
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.709
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.