STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113006623Polypeptide N-acetylgalactosaminyltransferase. (563 aa)    
Predicted Functional Partners:
LOC113013757
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.857
LOC113022557
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
     
 0.857
c1galt1c1
C1GALT1-specific chaperone 1.
     
 0.853
b3gnt3
Hexosyltransferase.
     
 0.822
B3GNT3
Hexosyltransferase.
     
 0.822
galnt7
Polypeptide N-acetylgalactosaminyltransferase.
  
  
0.703
nelfa
Negative elongation factor complex member A.
     
 0.602
LOC113027995
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.579
B3GALT1
Hexosyltransferase.
     
 0.560
LOC113016462
Hexosyltransferase.
     
 0.560
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.