Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
serpini1Serpin peptidase inhibitor, clade I (neuroserpin), member 1; Belongs to the serpin family. (416 aa)    
Predicted Functional Partners:
habp2
Uncharacterized protein.
  
 0.780
LOC113024201
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
  
0.666
LOC113014999
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino.
      
 0.655
plau
Plasminogen activator, urokinase a; Belongs to the peptidase S1 family.
   
 0.624
plat
Plasminogen activator, tissue.
   
 0.624
LOC113027817
Uncharacterized protein.
   
 0.624
LOC113008772
Pleiotrophin.
      
 0.614
LOC113016701
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
   
 0.605
mmut
Methylmalonyl CoA mutase.
      
 0.604
ENSACLP00000015449
TC1 domain-containing protein.
      
 0.601
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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