ENSACLP00000005727 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000005727

NAD(P)-bd_dom domain-containing protein. (356 aa)

Predicted Functional Partners:

ugdh

0.995

galt

0.986

gale

0.967

gmppb

0.951

ENSACLP00000018666

0.951

LOC113006349

0.945

uxs1

0.930

alg5

0.924

LOC113022889

0.924

LOC113007624

0.911

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000005727	ENSACLP00000018666	ENSACLP00000005727	ENSACLP00000018666	NAD(P)-bd_dom domain-containing protein.	NTP_transferase domain-containing protein.	0.951
ENSACLP00000005727	LOC113006349	ENSACLP00000005727	ENSACLP00000015657	NAD(P)-bd_dom domain-containing protein.	PPC domain-containing protein.	0.945
ENSACLP00000005727	LOC113007624	ENSACLP00000005727	ENSACLP00000003111	NAD(P)-bd_dom domain-containing protein.	Zgc:136439.	0.911
ENSACLP00000005727	LOC113022889	ENSACLP00000005727	ENSACLP00000031080	NAD(P)-bd_dom domain-containing protein.	Activity-dependent neuroprotector homeobox a.	0.924
ENSACLP00000005727	alg5	ENSACLP00000005727	ENSACLP00000004569	NAD(P)-bd_dom domain-containing protein.	ALG5 dolichyl-phosphate beta-glucosyltransferase.	0.924
ENSACLP00000005727	gale	ENSACLP00000005727	ENSACLP00000028574	NAD(P)-bd_dom domain-containing protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.967
ENSACLP00000005727	galt	ENSACLP00000005727	ENSACLP00000037647	NAD(P)-bd_dom domain-containing protein.	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	0.986
ENSACLP00000005727	gmppb	ENSACLP00000005727	ENSACLP00000015342	NAD(P)-bd_dom domain-containing protein.	GDP-mannose pyrophosphorylase B.	0.951
ENSACLP00000005727	ugdh	ENSACLP00000005727	ENSACLP00000022913	NAD(P)-bd_dom domain-containing protein.	UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.	0.995
ENSACLP00000005727	uxs1	ENSACLP00000005727	ENSACLP00000003159	NAD(P)-bd_dom domain-containing protein.	UDP-glucuronate decarboxylase 1.	0.930
ENSACLP00000018666	ENSACLP00000005727	ENSACLP00000018666	ENSACLP00000005727	NTP_transferase domain-containing protein.	NAD(P)-bd_dom domain-containing protein.	0.951
ENSACLP00000018666	LOC113006349	ENSACLP00000018666	ENSACLP00000015657	NTP_transferase domain-containing protein.	PPC domain-containing protein.	0.842
ENSACLP00000018666	LOC113022889	ENSACLP00000018666	ENSACLP00000031080	NTP_transferase domain-containing protein.	Activity-dependent neuroprotector homeobox a.	0.937
ENSACLP00000018666	alg5	ENSACLP00000018666	ENSACLP00000004569	NTP_transferase domain-containing protein.	ALG5 dolichyl-phosphate beta-glucosyltransferase.	0.776
ENSACLP00000018666	gale	ENSACLP00000018666	ENSACLP00000028574	NTP_transferase domain-containing protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.804
ENSACLP00000018666	galt	ENSACLP00000018666	ENSACLP00000037647	NTP_transferase domain-containing protein.	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	0.757
ENSACLP00000018666	ugdh	ENSACLP00000018666	ENSACLP00000022913	NTP_transferase domain-containing protein.	UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.	0.864
ENSACLP00000018666	uxs1	ENSACLP00000018666	ENSACLP00000003159	NTP_transferase domain-containing protein.	UDP-glucuronate decarboxylase 1.	0.931
LOC113006349	ENSACLP00000005727	ENSACLP00000015657	ENSACLP00000005727	PPC domain-containing protein.	NAD(P)-bd_dom domain-containing protein.	0.945
LOC113006349	ENSACLP00000018666	ENSACLP00000015657	ENSACLP00000018666	PPC domain-containing protein.	NTP_transferase domain-containing protein.	0.842