Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR180G protein-coupled receptor 180. (434 aa)    
Predicted Functional Partners:
ENSACLP00000005727
NAD(P)-bd_dom domain-containing protein.
   
  
 0.766
tmem161a
Transmembrane protein 161A.
      
 0.741
ENSACLP00000029601
Transmembrane protein 181.
      
 0.741
gpr176
G protein-coupled receptor 176.
      
 0.719
LOC113008499
Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family.
      
 0.666
tafa5
TAFA chemokine like family member 5.
      
 0.655
gpr146
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.622
gpr108
G protein-coupled receptor 108.
      
 0.614
sgce
Sarcoglycan, epsilon.
    
   0.614
LOC113027793
Sarcoglycan, alpha.
    
   0.614
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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