Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005742Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
LOC113026901
RAB, member of RAS oncogene family-like 2.
    
 0.828
ENSACLP00000023721
Small nuclear ribonucleoprotein polypeptide F.
   
 
 0.746
zmat5
Uncharacterized protein.
    
 
 0.696
LOC113015188
Coiled-coil domain containing 106b.
      
 0.692
ccdc77
Coiled-coil domain containing 77.
   
  
 0.688
LOC113013211
Nuclear envelope integral membrane protein 1.
   
  
 0.663
bdnf
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.654
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.646
cep85
Centrosomal protein 85.
      
 0.639
znf367
Zinc finger protein 367.
    
 
 0.639
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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