Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036120Programmed cell death 10a. (232 aa)    
Predicted Functional Partners:
ccm2
CCM2 scaffold protein.
    
 0.989
ENSACLP00000021424
Uncharacterized protein.
    
 0.919
ENSACLP00000021432
CCM2 like scaffold protein.
    
 0.919
LOC113007291-2
MOB family member 4, phocein.
   
 
 0.906
slmap
Sarcolemma associated protein a.
    
 
 0.889
LOC113013057
Uncharacterized protein.
    
 
 0.883
ENSACLP00000013574
CTTNBP2 N-terminal like b.
    
 
 0.866
LOC113021954
CTTNBP2 N-terminal like a.
    
 
 0.866
LOC113036096
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.845
ENSACLP00000004817
Striatin interacting protein 2.
    
 
 0.825
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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