STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenphCENP-H domain-containing protein. (277 aa)    
Predicted Functional Partners:
cenpk
Centromere protein K.
   
  0.750
cenpm
Uncharacterized protein.
   
  0.736
ENSACLP00000009845
Centromere protein N.
   
 0.722
cenpi
Centromere protein I.
   
 0.713
cenpp
Centromere protein P.
   
  0.694
ENSACLP00000011427
Uncharacterized protein.
   
 
  0.633
LOC113021205
Uncharacterized protein.
   
 
  0.600
CENPS
Centromere protein S.
     
 0.573
LOC113013504
Cortistatin.
     
 0.573
ENSACLP00000037674
UF2 component of NDC80 kinetochore complex.
   
 
 0.548
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.