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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eef1b2Eukaryotic translation elongation factor 1 beta 2; Belongs to the EF-1-beta/EF-1-delta family. (227 aa)    
Predicted Functional Partners:
ENSACLP00000009119
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
ENSACLP00000020299
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 0.999
rpl21
Ribosomal protein L21.
  
 
 0.999
rps4x
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 
 0.997
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.996
ENSACLP00000016157
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.996
ENSACLP00000022756
Ribosomal protein L9.
  
 
 0.996
tpt1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
  
 
 0.996
ENSACLP00000016203
Ribosomal protein L6.
   
 
 0.995
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.