LOC113020445 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC113020445

Formin-like 1a. (1111 aa)

Predicted Functional Partners:

LOC113022989

0.912

LOC113015068

0.785

ENSACLP00000023060

0.785

LOC113015067

0.785

LOC113015070

0.785

LOC113031477

0.785

ENSACLP00000025761

0.777

ENSACLP00000025930

0.777

LOC113027755

0.621

ENSACLP00000004729

0.621

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000004729	ENSACLP00000023060	ENSACLP00000004729	ENSACLP00000023060	Uncharacterized protein.	Cell division cycle 42, like.	0.595
ENSACLP00000004729	LOC113015067	ENSACLP00000004729	ENSACLP00000023081	Uncharacterized protein.	Cell division cycle 42, like.	0.585
ENSACLP00000004729	LOC113015068	ENSACLP00000004729	ENSACLP00000023023	Uncharacterized protein.	Cell division cycle 42, like.	0.579
ENSACLP00000004729	LOC113015070	ENSACLP00000004729	ENSACLP00000023148	Uncharacterized protein.	Uncharacterized protein.	0.589
ENSACLP00000004729	LOC113020445	ENSACLP00000004729	ENSACLP00000005792	Uncharacterized protein.	Formin-like 1a.	0.621
ENSACLP00000004729	LOC113022989	ENSACLP00000004729	ENSACLP00000036531	Uncharacterized protein.	Cell division cycle 42.	0.707
ENSACLP00000004729	LOC113031477	ENSACLP00000004729	ENSACLP00000036277	Uncharacterized protein.	Uncharacterized protein.	0.579
ENSACLP00000023060	ENSACLP00000004729	ENSACLP00000023060	ENSACLP00000004729	Cell division cycle 42, like.	Uncharacterized protein.	0.595
ENSACLP00000023060	LOC113020445	ENSACLP00000023060	ENSACLP00000005792	Cell division cycle 42, like.	Formin-like 1a.	0.785
ENSACLP00000023060	LOC113022989	ENSACLP00000023060	ENSACLP00000036531	Cell division cycle 42, like.	Cell division cycle 42.	0.723
ENSACLP00000023060	LOC113027755	ENSACLP00000023060	ENSACLP00000001078	Cell division cycle 42, like.	Rac family small GTPase 3b.	0.593
ENSACLP00000025761	LOC113020445	ENSACLP00000025761	ENSACLP00000005792	Uncharacterized protein.	Formin-like 1a.	0.777
ENSACLP00000025930	LOC113020445	ENSACLP00000025930	ENSACLP00000005792	Uncharacterized protein.	Formin-like 1a.	0.777
LOC113015067	ENSACLP00000004729	ENSACLP00000023081	ENSACLP00000004729	Cell division cycle 42, like.	Uncharacterized protein.	0.585
LOC113015067	LOC113020445	ENSACLP00000023081	ENSACLP00000005792	Cell division cycle 42, like.	Formin-like 1a.	0.785
LOC113015067	LOC113022989	ENSACLP00000023081	ENSACLP00000036531	Cell division cycle 42, like.	Cell division cycle 42.	0.716
LOC113015067	LOC113027755	ENSACLP00000023081	ENSACLP00000001078	Cell division cycle 42, like.	Rac family small GTPase 3b.	0.578
LOC113015068	ENSACLP00000004729	ENSACLP00000023023	ENSACLP00000004729	Cell division cycle 42, like.	Uncharacterized protein.	0.579
LOC113015068	LOC113020445	ENSACLP00000023023	ENSACLP00000005792	Cell division cycle 42, like.	Formin-like 1a.	0.785
LOC113015068	LOC113022989	ENSACLP00000023023	ENSACLP00000036531	Cell division cycle 42, like.	Cell division cycle 42.	0.713