STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022620Advillin. (818 aa)    
Predicted Functional Partners:
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.695
ENSACLP00000010243
Component of oligomeric golgi complex 3.
    
 
 0.688
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.648
LOC113015779
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.648
ENSACLP00000036802
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 
 0.644
ENSACLP00000036839
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 
 0.644
cog4
Component of oligomeric golgi complex 4.
    
 
 0.579
smim7
Small integral membrane protein 7.
    
 
 0.579
ENSACLP00000012355
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.517
ENSACLP00000015461
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.517
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.