Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113027072ATP/GTP binding protein-like 2. (1012 aa)    
Predicted Functional Partners:
ENSACLP00000010927
Tubulin tyrosine ligase-like family, member 4.
    
 
 0.755
lxn
Latexin.
    
 
 0.705
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.675
ptpmt1
Protein tyrosine phosphatase mitochondrial 1.
      
 0.669
tmem192
Transmembrane protein 192.
    
 
 0.658
slc39a13
Solute carrier family 39 member 13.
      
 0.655
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
      
 0.575
LOC113030211
Cell adhesion molecule 2a.
      
 0.528
cadm2
Cell adhesion molecule 2b.
      
 0.528
ap3m2
AP-3 complex subunit mu-2.
      
 0.527
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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