Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113011381Eph receptor A4b. (984 aa)    
Predicted Functional Partners:
LOC113032405
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.890
efnb1
Ephrin-B1; Belongs to the ephrin family.
   
 0.884
LOC113011684
Ephrin-A2a; Belongs to the ephrin family.
   
 0.864
LOC113008784
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.860
efna1
Ephrin-A1b; Belongs to the ephrin family.
   
 0.857
LOC113015357
Ephrin-A1a; Belongs to the ephrin family.
   
 0.856
efnb3
Ephrin-B3a; Belongs to the ephrin family.
   
 0.806
efnb2
Ephrin-B2a; Belongs to the ephrin family.
   
 0.806
EFNA5
Ephrin A5; Belongs to the ephrin family.
   
 0.772
LOC113026046
Ephrin-A5a; Belongs to the ephrin family.
   
 0.772
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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